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{"original_bigg_ids": ["ASNN"]}, "metabolites": {"asp__L_c": 1.0, "h2o_c": -1.0, "asn__L_c": -1.0, "nh4_c": 1.0}, "id": "ASNN", "gene_reaction_rule": "sll0422"}, {"subsystem": "Alanine, aspartate and glutamate metabolism", "name": "Asparaginyl-tRNA synthetase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ASNTRS"]}, "metabolites": {"trnaasn_c": -1.0, "atp_c": -1.0, "ppi_c": 1.0, "amp_c": 1.0, "asntrna_c": 1.0, "asn__L_c": -1.0}, "id": "ASNTRS", "gene_reaction_rule": "asnS"}, {"subsystem": "Alanine, aspartate and glutamate metabolism", "name": "Aspartate 1-decarboxylase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ASP1DC"]}, "metabolites": {"asp__L_c": -1.0, "co2_c": 1.0, "h_c": -1.0, "ala_B_c": 1.0}, "id": "ASP1DC", "gene_reaction_rule": "panD"}, {"subsystem": "Pyrimidine metabolism", "name": "Aspartate carbamoyltransferase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ASPCT"]}, "metabolites": {"asp__L_c": -1.0, "cbasp_c": 1.0, "cbp_c": -1.0, "pi_c": 1.0, "h_c": 1.0}, "id": "ASPCT", "gene_reaction_rule": "pyrB"}, {"subsystem": "Alanine, aspartate and glutamate metabolism", "name": "Aspartate kinase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ASPKi"]}, "metabolites": {"asp__L_c": -1.0, "adp_c": 1.0, "atp_c": -1.0, "4pasp_c": 1.0}, "id": "ASPK", "gene_reaction_rule": "lysC"}, {"subsystem": "Nicotinate and nicotinamide metabolism", "name": "L-aspartate oxidase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ASPO6"]}, "metabolites": {"asp__L_c": -1.0, "o2_c": -1.0, "iasp_c": 1.0, "h_c": 1.0, "h2o2_c": 1.0}, "id": "ASPO6", "gene_reaction_rule": "nadB"}, {"subsystem": "Carbon fixation", "name": "Aspartate transaminase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ASPTA"]}, "metabolites": {"asp__L_c": -1.0, "akg_c": -1.0, "glu__L_c": 1.0, "oaa_c": 1.0}, "id": "ASPTA", "gene_reaction_rule": "aspC or sll0480 or aspC"}, {"subsystem": "Alanine, aspartate and glutamate metabolism", "name": "Aspartyl-tRNA synthetase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ASPTRS"]}, "metabolites": {"asptrna_c": 1.0, "atp_c": -1.0, "asp__L_c": -1.0, "ppi_c": 1.0, "amp_c": 1.0, "trnaasp_c": -1.0}, "id": "ASPTRS", "gene_reaction_rule": "aspS"}, {"subsystem": "Oxidative phosphorylation", "name": "ATP synthase (four protons for one ATP) (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ATPS4rpp"]}, "metabolites": {"h2o_c": 3.0, "atp_c": 3.0, "h_p": -14.0, "h_c": 11.0, "adp_c": -3.0, "pi_c": -3.0}, "id": "ATPS4rpp_1", "gene_reaction_rule": "atpI and atpG and atpF and atpA and atpD and atpC and atpB and atpE and atpH and atp1"}, {"subsystem": "Oxidative phosphorylation", "name": "ATP synthetase(u)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ATPSu"]}, "metabolites": {"h2o_c": 3.0, "h_u": -14.0, "atp_c": 3.0, "h_c": 11.0, "adp_c": -3.0, "pi_c": -3.0}, "id": "ATPSu", "gene_reaction_rule": "atpI and atpG and atpF and atpA and atpD and atpC and atpB and atpE and atpH and atp1"}, {"subsystem": "Histidine metabolism", "name": "ATP phosphoribosyltransferase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ATPPRT"]}, "metabolites": {"ppi_c": 1.0, "prpp_c": -1.0, "atp_c": -1.0, "prbatp_c": 1.0}, "id": "ATPPRT", "gene_reaction_rule": "hisG"}, {"subsystem": "Others", "name": "Beta-Aminopropion aldehyde NAD+ oxidoreductase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["BAMPPALDOX"]}, "metabolites": {"h2o_c": -1.0, "nad_c": -1.0, "h_c": 2.0, "ala_B_c": 1.0, "nadh_c": 1.0, "bamppald_c": -1.0}, "id": "BAMPPALDOX", "gene_reaction_rule": "slr0091"}, {"subsystem": "Carotenoid Biosynthesis", "name": "Beta-carotene hydroxylase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["BCAROHX"]}, "metabolites": {"o2_c": -1.0, "h2o_c": 1.0, "bcryptox_c": 1.0, "nadph_c": -1.0, "bcarote_c": -1.0, "nadp_c": 1.0, "h_c": -1.0}, "id": "BCAROHX", "gene_reaction_rule": "bhy"}, {"subsystem": "Carotenoid Biosynthesis", "name": "Beta-carotene hydroxylase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["BCAROHX2"]}, "metabolites": {"zeax_c": 1.0, "o2_c": -1.0, "h2o_c": 1.0, "nadp_c": 1.0, "nadph_c": -1.0, "bcryptox_c": -1.0, "h_c": -1.0}, "id": "BCAROHX2", "gene_reaction_rule": "bhy"}, {"subsystem": "Carotenoid Biosynthesis", "name": "Beta-carotene ketolase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["BCAROKE"]}, "metabolites": {"echin_c": 1.0, "o2_c": -1.0, "h2o_c": 1.0, "bcarote_c": -1.0}, "id": "BCAROKE", "gene_reaction_rule": "crtO"}, {"subsystem": "Porphyrin and chlorophyll metabolism", "name": "Nad(p)h biliverdin reductase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["BILIRED"]}, "metabolites": {"biliverd_c": -1.0, "nadp_c": 1.0, "nadph_c": -1.0, "h_c": -1.0, "bilirub_c": 1.0}, "id": "BILIRED", "gene_reaction_rule": "bvdR"}, {"subsystem": "PHB byosynthesis", "name": "Acetyl-CoA C-acetyltransferase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["BKTIO_syn"]}, "metabolites": {"aacoa_c": 1.0, "coa_c": 1.0, "accoa_c": -2.0}, "id": "ACACT1r", "gene_reaction_rule": "thl"}, {"subsystem": "Biotin metabolism", "name": "Biotin synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["BTS4"]}, "metabolites": {"btn_c": 1.0, "dtbt_c": -1.0, "dad_5_c": 1.0, "s_c": -1.0, "h_c": 1.0, "met__L_c": 1.0, "amet_c": -1.0}, "id": "BTS4", "gene_reaction_rule": "bioB"}, {"subsystem": "Phenylalanine tyrosine and tryptophan biosynthesis", "name": "Catalase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["CAT"]}, "metabolites": {"h2o2_c": -2.0, "h2o_c": 2.0, "o2_c": 1.0}, "id": "CAT", "gene_reaction_rule": "katG"}, {"subsystem": "Photosynthesis", "name": "Cytochrome b6/f complex", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["CBFC2"]}, "metabolites": {"focytc6_u": 2.0, "h_u": 4.0, "pq_u": 1.0, "pqh2_u": -1.0, "ficytc6_u": -2.0, "h_c": -2.0}, "id": "CBFC2", "gene_reaction_rule": "petA and petB and petC and petC and petC and petD and petE and petG and ssl3803 and petM and ycf6 and cpcA and cpcB and cpcC and cpcC and cpcD and cpcE and cpcF and cpcG and cpcG and apcA and apcB and apcC and apcD and apcE and apcF"}, {"subsystem": "Oxidative phosphorylation", "name": "Cytochrome b6/f complex periplasm", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["CBFCpp"]}, "metabolites": {"pq_p": 1.0, "pqh2_p": -1.0, "pcox_p": -2.0, "h_p": 4.0, "pcrd_p": 2.0, "h_c": -2.0}, "id": "CBFCpp", "gene_reaction_rule": "petA and petB and petC and petC and petC and petD and petE and petG and ssl3803 and petM and ycf6 and cpcA and cpcB and cpcC and cpcC and cpcD and cpcE and cpcF and cpcG and cpcG and apcA and apcB and apcC and apcD and apcE and apcF"}, {"subsystem": "Photosynthesis", "name": "Cytochrome b6/f complex", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["CBFCu"]}, "metabolites": {"pcox_u": -2.0, "pqh2_u": -1.0, "pcrd_u": 2.0, "pq_u": 1.0, "h_u": 4.0, "h_c": -2.0}, "id": "CBFCu", "gene_reaction_rule": "petA and petB and petC and petC and petC and petD and petE and petG and ssl3803 and petM and ycf6 and cpcA and cpcB and cpcC and cpcC and cpcD and cpcE and cpcF and cpcG and cpcG and apcA and apcB and apcC and apcD and apcE and apcF"}, {"subsystem": "Oxidative phosphorylation", "name": "Cytochrome b6/f complex periplasm", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["CBFC2pp"]}, "metabolites": {"pq_p": 1.0, "pqh2_p": -1.0, "h_p": 4.0, "ficytc6_p": -2.0, "h_c": -2.0, "focytc6_p": 2.0}, "id": "CBFC2pp", "gene_reaction_rule": "petA and petB and petC and petC and petC and petD and petE and petG and ssl3803 and petM and ycf6 and cpcA and cpcB and cpcC and cpcC and cpcD and cpcE and cpcF and cpcG and cpcG and apcA and apcB and apcC and apcD and apcE and apcF"}, {"subsystem": "Nitrogen metabolism", "name": "Carbamate kinase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["CBMK"]}, "metabolites": {"cbp_c": 1.0, "atp_c": -1.0, "h_c": 2.0, "adp_c": 1.0, "co2_c": -1.0, "nh4_c": -1.0}, "id": "CBMKr", "gene_reaction_rule": "arcC"}, {"subsystem": "Pyrimidine metabolism", "name": "Carbamoyl-phosphate synthase (glutamine-hydrolysing)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["CBPS"]}, "metabolites": {"cbp_c": 1.0, "atp_c": -2.0, "hco3_c": -1.0, "glu__L_c": 1.0, "h2o_c": -1.0, "h_c": 2.0, "adp_c": 2.0, "pi_c": 1.0, "gln__L_c": -1.0}, "id": "CBPS", "gene_reaction_rule": "carB and carA"}, {"subsystem": "Terpenoid backbone biosynthesis", "name": "4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["CDPMEK"]}, "metabolites": {"2p4c2me_c": 1.0, "4c2me_c": -1.0, "adp_c": 1.0, "atp_c": -1.0, "h_c": 1.0}, "id": "CDPMEK", "gene_reaction_rule": "sll0711"}, {"subsystem": "Photosynthesis", "name": "Cyclic Electron Flow", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["FQR"]}, "metabolites": {"h_c": -2.0, "pqh2_u": 1.0, "fdxr_2_2_c": -2.0, "pq_u": -1.0, "fdxo_2_2_c": 2.0}, "id": "FQR", "gene_reaction_rule": "ssr2016"}, {"subsystem": "Phenylalanine tyrosine and tryptophan biosynthesis", "name": "Chorismate mutase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["CHORM"]}, "metabolites": {"chor_c": -1.0, "pphn_c": 1.0}, "id": "CHORM", "gene_reaction_rule": "aroH"}, {"subsystem": "Phenylalanine tyrosine and tryptophan biosynthesis", "name": "Chorismate synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["CHORS"]}, "metabolites": {"chor_c": 1.0, "pi_c": 1.0, "3psme_c": -1.0}, "id": "CHORS", "gene_reaction_rule": "aroC"}, {"subsystem": "Porphyrin and chlorophyll metabolism", "name": "Chlorophyll a synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["CHPHYS"]}, "metabolites": {"cholphya_c": 1.0, "chlld_c": -1.0, "phdp_c": -1.0, "ppi_c": 1.0, "h_c": -1.0}, "id": "CHPHYS", "gene_reaction_rule": "chlG"}, {"subsystem": "Porphyrin and chlorophyll metabolism", "name": "COCHL", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["COCHL"]}, "metabolites": {"h2o_c": -1.0, "atp_c": -1.0, "cobalt2_c": -1.0, "co2dam_c": 1.0, "h_c": 2.0, "adp_c": 1.0, "hgbam_c": -1.0, "pi_c": 1.0}, "id": "COCHL", "gene_reaction_rule": "cobN"}, {"subsystem": "Porphyrin and chlorophyll metabolism", "name": "Coproporphyrinogen oxidase (O2 required)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["CPPPGO"]}, 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4-diphosphate reductase (dmpp)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DMPPS_syn"]}, "metabolites": {"h2o_c": 1.0, "nadp_c": 1.0, "nadph_c": -1.0, "dmpp_c": 1.0, "h2mb4p_c": -1.0, "h_c": -1.0}, "id": "DMPPS_syn", "gene_reaction_rule": "slr0348"}, {"subsystem": "Folate biosynthesis", "name": "Dihydroneopterin monophosphate dephosphorylase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DNMPPA"]}, "metabolites": {"h2o_c": -1.0, "dhnpt_c": 1.0, "pi_c": 1.0, "dhpmp_c": -1.0}, "id": "DNMPPA", "gene_reaction_rule": ""}, {"subsystem": "Folate biosynthesis", "name": "Dihydroneopterin triphosphate pyrophosphatase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DNTPPA"]}, "metabolites": {"h2o_c": -1.0, "ppi_c": 1.0, "h_c": 1.0, "dhpmp_c": 1.0, "ahdt_c": -1.0}, "id": "DNTPPA", "gene_reaction_rule": ""}, {"subsystem": "Pantothenate and CoA biosynthesis", "name": "Dephospho-CoA kinase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DPCOAK"]}, "metabolites": {"dpcoa_c": -1.0, "coa_c": 1.0, "adp_c": 1.0, "atp_c": -1.0, "h_c": 1.0}, "id": "DPCOAK", "gene_reaction_rule": "slr0553"}, {"subsystem": "Glycolysis/Gluconeogenesis", "name": "Diphosphoglyceromutase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["DPGM"]}, "metabolites": {"23dpg_c": 1.0, "13dpg_c": -1.0, "h_c": 1.0}, "id": "DPGM", "gene_reaction_rule": "yibO"}, {"subsystem": "Porphyrin and chlorophyll metabolism", "name": "Protochlorophyllide oxidoreductase ", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["POR"]}, "metabolites": {"chlld_c": 1.0, "nadp_c": 1.0, "nadph_c": -1.0, "pchlld_c": -1.0, "h_c": -1.0}, "id": "POR_1", "gene_reaction_rule": "(chlL and chlN and chlB) or pcr"}, {"subsystem": "Pantothenate and CoA biosynthesis", "name": "2-dehydropantoate 2-reductase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": 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"slr0379"}, {"subsystem": "Porphyrin and chlorophyll metabolism", "name": "Divinyl protochlorophyllide a 8-vinyl-reductase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DVOCHR"]}, "metabolites": {"dvpchlld_c": -1.0, "nadp_c": 1.0, "nadph_c": -1.0, "pchlld_c": 1.0, "h_c": -1.0}, "id": "DVOCHR", "gene_reaction_rule": ""}, {"subsystem": "Sterol biosynthesis", "name": "1-deoxy-D-xylulose reductoisomerase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DXPRIi"]}, "metabolites": {"2me4p_c": 1.0, "dxyl5p_c": -1.0, "nadp_c": 1.0, "nadph_c": -1.0, "h_c": -1.0}, "id": "DXPRIi", "gene_reaction_rule": "sll0019"}, {"subsystem": "Sterol biosynthesis", "name": "1-deoxy-D-xylulose 5-phosphate synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DXPS"]}, "metabolites": {"pyr_c": -1.0, "dxyl5p_c": 1.0, "co2_c": 1.0, "g3p_c": -1.0, "h_c": -1.0}, "id": "DXPS", "gene_reaction_rule": "sll1945"}, {"subsystem": "Fatty acid biosynthesis", "name": "Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C10:0)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EAR100y"]}, "metabolites": {"tdec2eACP_c": -1.0, "dcaACP_c": 1.0, "nadp_c": 1.0, "nadph_c": -1.0, "h_c": -1.0}, "id": "EAR100y", "gene_reaction_rule": "envM"}, {"subsystem": "Fatty acid biosynthesis", "name": "Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C12:0)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EAR120y"]}, "metabolites": {"tddec2eACP_c": -1.0, "nadp_c": 1.0, "nadph_c": -1.0, "h_c": -1.0, "ddcaACP_c": 1.0}, "id": "EAR120y", "gene_reaction_rule": "envM"}, {"subsystem": "Fatty acid biosynthesis", "name": "Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C12:1)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EAR121y"]}, "metabolites": {"nadph_c": -1.0, "nadp_c": 1.0, "t3c5ddeceACP_c": -1.0, "cddec5eACP_c": 1.0, "h_c": -1.0}, "id": "EAR121y", 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and chlorophyll metabolism", "name": "Ferrochelatase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["FCLT"]}, "metabolites": {"fe2_c": -1.0, "ppp9_c": -1.0, "h_c": 2.0, "pheme_c": 1.0}, "id": "FCLT", "gene_reaction_rule": "hemH"}, {"subsystem": "Sulfur Cysteine and methionine metabolism", "name": "Methionyl-tRNA formyltransferase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["FMETTRS"]}, "metabolites": {"h_c": 1.0, "mettrna_c": -1.0, "10fthf_c": -1.0, "fmettrna_c": 1.0, "thf_c": 1.0}, "id": "FMETTRS", "gene_reaction_rule": "fmt"}, {"subsystem": "Riboflavin metabolism", "name": "FMN adenylyltransferase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["FMNAT"]}, "metabolites": {"ppi_c": 1.0, "fmn_c": -1.0, "atp_c": -1.0, "fad_c": 1.0, "h_c": -1.0}, "id": "FMNAT", "gene_reaction_rule": "slr1882"}, {"subsystem": "Photosynthesis", "name": "Ferredoxin---NADP+ reductase", "upper_bound": 1000.0, 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"Fatty acid biosynthesis", "name": "Glycerol-3-phosphate acyltransferase (C18 2)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["G3PAT182_LPAREN_9_12_RPAREN_"]}, "metabolites": {"1odec912eg3p_c": 1.0, "glyc3p_c": -1.0, "ACP_c": 1.0, "octe_9_12_ACP_c": -1.0}, "id": "G3PAT182_9_12", "gene_reaction_rule": "sll1510 or sll1973"}, {"subsystem": "Fatty acid biosynthesis", "name": "Glycerol-3-phosphate acyltransferase (C18 3)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["G3PAT183_LPAREN_6_9_12_RPAREN_"]}, "metabolites": {"octe_6_9_12_15_ACP_c": -1.0, "glyc3p_c": -1.0, "ACP_c": 1.0, "1odec691215eg3p_c": 1.0}, "id": "G3PAT183_6_9_12", "gene_reaction_rule": "sll1510 or sll1973"}, {"subsystem": "Fatty acid biosynthesis", "name": "Glycerol-3-phosphate acyltransferase (C18 3)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["G3PAT183_LPAREN_9_12_15_RPAREN_"]}, "metabolites": {"octe_9_12_15_ACP_c": -1.0, "glyc3p_c": -1.0, "ACP_c": 1.0, "1odec91215eg3p_c": 1.0}, "id": "G3PAT183_9_12_15", "gene_reaction_rule": "sll1510 or sll1973"}, {"subsystem": "Fatty acid biosynthesis", "name": "Glycerol-3-phosphate acyltransferase (C18 4)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["G3PAT184_LPAREN_6_9_12_15_RPAREN_"]}, "metabolites": {"1odec6912eg3p_c": 1.0, "ACP_c": 1.0, "octe_6_9_12_ACP_c": -1.0, "glyc3p_c": -1.0}, "id": "G3PAT184_6_9_12_15", "gene_reaction_rule": "sll1510 or sll1973"}, {"subsystem": "Glycerolipid metabolism", "name": "G3PD", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["G3PD"]}, "metabolites": {"glyc3p_c": -1.0, "dhap_c": 1.0, "fadh2_c": 1.0, "fad_c": -1.0}, "id": "G3PD", "gene_reaction_rule": "glpD"}, {"subsystem": "Glycerolipid metabolism", "name": "G3PD1", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["G3PD2"]}, "metabolites": {"glyc3p_c": -1.0, "dhap_c": 1.0, "nadh_c": 1.0, "h_c": 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"Carbon fixation", "name": "Glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["GAPDi_LPAREN_nadp_RPAREN_"]}, "metabolites": {"nadp_c": 1.0, "nadph_c": -1.0, "g3p_c": 1.0, "h_c": -1.0, "13dpg_c": -1.0, "pi_c": 1.0}, "id": "GAPDi_nadp", "gene_reaction_rule": "gap2"}, {"subsystem": "Purine metabolism", "name": "Phosphoribosylglycinamide formyltransferase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["GARFT"]}, "metabolites": {"gar_c": -1.0, "10fthf_c": -1.0, "fgam_c": 1.0, "thf_c": 1.0, "h_c": 1.0}, "id": "GARFT", "gene_reaction_rule": "purN or purT"}, {"subsystem": "Carotenoid Biosynthesis", "name": "Gamma carotene bcyclase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["GCATENEC"]}, "metabolites": {"gcarote_c": -1.0, "bcarote_c": 1.0}, "id": "GCATENEC", "gene_reaction_rule": ""}, {"subsystem": "Glutamate metabolism", "name": "Glutamine-fructose-6-phosphate transaminase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["GF6PTA"]}, "metabolites": {"glu__L_c": 1.0, "f6p_c": -1.0, "gam6p_c": 1.0, "gln__L_c": -1.0}, "id": "GF6PTA", "gene_reaction_rule": "glmS"}, {"subsystem": "Fructose and mannose metabolism", "name": "GFUCS", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["GFUCS"]}, "metabolites": {"gdpfuc_c": 1.0, "nadp_c": 1.0, "nadph_c": -1.0, "gdpddman_c": -1.0, "h_c": -1.0}, "id": "GFUCS", "gene_reaction_rule": "sll1213"}, {"subsystem": "Arginine and proline metabolism", "name": "Glycine hydroxymethyltransferase, reversible", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["GHMT2r"]}, "metabolites": {"h2o_c": 1.0, "ser__L_c": -1.0, "thf_c": -1.0, "mlthf_c": 1.0, "gly_c": 1.0}, "id": "GHMT2r", "gene_reaction_rule": "gylA"}, {"subsystem": "Purine metabolism", "name": "Guanylate kinase (GMP:ATP)", "upper_bound": 1000.0, 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{"subsystem": "Glutathione metabolism", "name": "Glutathione peridoxase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["GTHP"]}, "metabolites": {"h2o2_c": -1.0, "h2o_c": 2.0, "gthrd_c": -2.0, "gthox_c": 1.0}, "id": "GTHPi", "gene_reaction_rule": "slr1992 or slr1171"}, {"subsystem": "Glutathione metabolism", "name": "Glutathione hydralase (periplasmic)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["GTHRDH_syn"]}, "metabolites": {"glu__L_c": 1.0, "gthrd_c": -1.0, "h2o_c": -1.0, "cgly_c": 1.0}, "id": "GTHRDH_syn", "gene_reaction_rule": "ggt"}, {"subsystem": "Glutamate metabolism", "name": "Glutathione synthetase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["GTHS"]}, "metabolites": {"pi_c": 1.0, "atp_c": -1.0, "h_c": 1.0, "adp_c": 1.0, "glucys_c": -1.0, "gthrd_c": 1.0, "gly_c": -1.0}, "id": "GTHS", "gene_reaction_rule": "gshB"}, {"subsystem": "Folate biosynthesis", "name": "GTP cyclohydrolase 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{"subsystem": "Phenylalanine tyrosine and tryptophan biosynthesis", "name": "Indole-3-glycerol-phosphate synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["IGPS"]}, "metabolites": {"h2o_c": 1.0, "co2_c": 1.0, "h_c": -1.0, "2cpr5p_c": -1.0, "3ig3p_c": 1.0}, "id": "IGPS", "gene_reaction_rule": "trpC"}, {"subsystem": "Valine leucine and isoleucine biosynthesis", "name": "Isoleucine transaminase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ILETA"]}, "metabolites": {"ile__L_c": -1.0, "akg_c": -1.0, "glu__L_c": 1.0, "3mop_c": 1.0}, "id": "ILETA", "gene_reaction_rule": "ilvE"}, {"subsystem": "Valine leucine and isoleucine biosynthesis", "name": "Isoleucyl-tRNA synthetase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ILETRS"]}, "metabolites": {"iletrna_c": 1.0, "trnaile_c": -1.0, "atp_c": -1.0, "ile__L_c": -1.0, "ppi_c": 1.0, "amp_c": 1.0}, "id": "ILETRS", "gene_reaction_rule": "ileS"}, {"subsystem": "Histidine metabolism", "name": "Imidazole acetaldeyde dehydrogenase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["IMACTD"]}, "metabolites": {"h2o_c": -1.0, "im4ac_c": 1.0, "im4act_c": -1.0, "h_c": 2.0, "nad_c": -1.0, "nadh_c": 1.0}, "id": "IMACTD", "gene_reaction_rule": "slr0091"}, {"subsystem": "Purine metabolism", "name": "IMP cyclohydrolase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["IMPC"]}, "metabolites": {"h2o_c": -1.0, "fprica_c": 1.0, "imp_c": -1.0}, "id": "IMPC", "gene_reaction_rule": "purH"}, {"subsystem": "Purine metabolism", "name": "IMP dehydrogenase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["IMPD"]}, "metabolites": {"xmp_c": 1.0, "h2o_c": -1.0, "h_c": 1.0, "nad_c": -1.0, "nadh_c": 1.0, "imp_c": -1.0}, "id": "IMPD", "gene_reaction_rule": "guaB"}, {"subsystem": "Sterol biosynthesis", "name": "Isopentenyl-diphosphate D-isomerase", "upper_bound": 1000.0, 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["LPADSS"]}, "metabolites": {"u23ga_c": -1.0, "udp_c": 1.0, "lipidAds_c": 1.0, "lipidX_c": -1.0, "h_c": 1.0}, "id": "LPADSS", "gene_reaction_rule": "lpxB"}, {"subsystem": "Carotenoid Biosynthesis", "name": "Lycopene cyclase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["LYCOPC"]}, "metabolites": {"lycop_c": -1.0, "gcarote_c": 1.0}, "id": "LYCOPC", "gene_reaction_rule": ""}, {"subsystem": "Lysine metabolism", "name": "Lysine decarboxylase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["LYSDC"]}, "metabolites": {"15dap_c": 1.0, "co2_c": 1.0, "lys__L_c": -1.0, "h_c": -1.0}, "id": "LYSDC", "gene_reaction_rule": "cad"}, {"subsystem": "Lysine metabolism", "name": "Lysyl-tRNA synthetase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["LYSTRS"]}, "metabolites": {"trnalys_c": -1.0, "lys__L_c": -1.0, "atp_c": -1.0, "ppi_c": 1.0, "amp_c": 1.0, "lystrna_c": 1.0}, "id": "LYSTRS", "gene_reaction_rule": "lysS"}, {"subsystem": "Starch and sucrose metabolism", "name": "Alpha glucosidase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["MALT"]}, "metabolites": {"glc__D_c": 2.0, "h2o_c": -1.0, "malt_c": -1.0}, "id": "MALT", "gene_reaction_rule": "malQ"}, {"subsystem": "Fructose and mannose metabolism", "name": "Mannose 1 phosphate guanylyltransferase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["MAN1PT"]}, "metabolites": {"gdpmann_c": 1.0, "ppi_c": 1.0, "gtp_c": -1.0, "man1p_c": -1.0, "h_c": -1.0}, "id": "MAN1PT", "gene_reaction_rule": "sll1496 or sll1558"}, {"subsystem": "Fructose and mannose metabolism", "name": "Mannose-1-phosphate guanylyltransferase (GDP)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["MAN1PT2"]}, "metabolites": {"gdpmann_c": 1.0, "pi_c": 1.0, "gdp_c": -1.0, "man1p_c": -1.0, "h_c": -1.0}, "id": "MAN1PT2", "gene_reaction_rule": "rfbM or rfbM or manA"}, {"subsystem": "Fructose and mannose 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["MEPCT"]}, "metabolites": {"ctp_c": -1.0, "2me4p_c": -1.0, "ppi_c": 1.0, "4c2me_c": 1.0, "h_c": -1.0}, "id": "MEPCT", "gene_reaction_rule": "slr0951"}, {"subsystem": "Sulfur Cysteine and methionine metabolism", "name": "Methionine adenosyltransferase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["METAT"]}, "metabolites": {"h2o_c": -1.0, "atp_c": -1.0, "ppi_c": 1.0, "met__L_c": -1.0, "amet_c": 1.0, "pi_c": 1.0}, "id": "METAT", "gene_reaction_rule": "metX"}, {"subsystem": "Sulfur Cysteine and methionine metabolism", "name": "Methionine synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["METS"]}, "metabolites": {"hcys__L_c": -1.0, "thf_c": 1.0, "5mthf_c": -1.0, "met__L_c": 1.0, "h_c": 1.0}, "id": "METS", "gene_reaction_rule": "metH"}, {"subsystem": "Sulfur Cysteine and methionine metabolism", "name": "Methionyl-tRNA synthetase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["METTRS"]}, 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3-beta-D-galactosyltransferase (n-C18 0)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["MGDG180"]}, "metabolites": {"udpgal_c": -1.0, "udp_c": 1.0, "12dgr180_c": -1.0, "h_c": 1.0, "mgdg180_c": 1.0}, "id": "MGDG180", "gene_reaction_rule": "slr1508"}, {"subsystem": "Galactolipids metabolism", "name": "UDPgalactose 1,2-diacylglycerol 3-beta-D-galactosyltransferase (n-C18 1)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["MGDG181"]}, "metabolites": {"12dgr181_c": -1.0, "udpgal_c": -1.0, "udp_c": 1.0, "h_c": 1.0, "mgdg181_c": 1.0}, "id": "MGDG181", "gene_reaction_rule": "slr1508"}, {"subsystem": "Galactolipids metabolism", "name": "UDPgalactose 1,2-diacylglycerol 3-beta-D-galactosyltransferase (n-C18 1)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["MGDG181_LPAREN_9_RPAREN_"]}, "metabolites": {"mgdg181_9_c": 1.0, "udpgal_c": -1.0, "12dgr181_9_c": -1.0, "udp_c": 1.0, "h_c": 1.0}, "id": "MGDG181_9", 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["NDH2_syn"]}, "metabolites": {"pqh2_u": 1.0, "nadh_c": -1.0, "h_c": -1.0, "nad_c": 1.0, "pq_u": -1.0}, "id": "NDH2_syn", "gene_reaction_rule": "ndh or ndh or ndh"}, {"subsystem": "Oxidative phosphorylation", "name": "NAD(P)H dehydrogenase (plastoquinone-8 & 3 protons) (tilacoide)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["NDH1_1u"]}, "metabolites": {"pqh2_u": 1.0, "h_u": 3.0, "nadph_c": -1.0, "pq_u": -1.0, "nadp_c": 1.0, "h_c": -4.0}, "id": "NDH1_1u", "gene_reaction_rule": "(ndhD or ndhD2) and ndhF and ndhA and ndhB and ndhC and ndhE and ndhG and ndhH and ndhI and ndhJ and (ndhK or sll8031) and slr1623 and sll1262 and sll1220 and hoxF and hoxU"}, {"subsystem": "Oxidative phosphorylation", "name": "NAD(P)H dehydrogenase (plastoquinone-8 & 3 protons) (tilacoide)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["NDH1_2u"]}, "metabolites": {"pqh2_u": 1.0, "h_u": 3.0, "pq_u": -1.0, "h_c": -4.0, "nad_c": 1.0, "nadh_c": -1.0}, 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"lower_bound": 0.0, "notes": {"original_bigg_ids": ["NDH1_1p"]}, "metabolites": {"pq_p": -1.0, "nadp_c": 1.0, "nadph_c": -1.0, "h_p": 3.0, "h_c": -4.0, "pqh2_p": 1.0}, "id": "NDH1_1p", "gene_reaction_rule": "(ndhD or ndhD2) and ndhF and ndhA and ndhB and ndhC and ndhE and ndhG and ndhH and ndhI and ndhJ and (ndhK or sll8031) and slr1623 and sll1262 and sll1220 and hoxF and hoxU"}, {"subsystem": "Glutamate metabolism", "name": "Nicotinate-mononucleotide adenylyltransferase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["NADS2"]}, "metabolites": {"dnad_c": -1.0, "h2o_c": -1.0, "atp_c": -1.0, "h_c": 1.0, "glu__L_c": 1.0, "amp_c": 1.0, "nad_c": 1.0, "ppi_c": 1.0, "gln__L_c": -1.0}, "id": "NADS2", "gene_reaction_rule": "nadE"}, {"subsystem": "Nicotinate and nicotinamide metabolism", "name": "NAD transhydrogenase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["NADTRHD"]}, "metabolites": {"nadp_c": 1.0, "nadph_c": -1.0, "nadh_c": 1.0, "nad_c": -1.0}, "id": "NADTRHD", "gene_reaction_rule": "pntA and pntB"}, {"subsystem": "Nitrogen metabolism", "name": "Ferredoxin-nitrate reductase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["NAR_syn"]}, "metabolites": {"h2o_c": 1.0, "no3_c": -1.0, "fdxo_2_2_c": 2.0, "fdxr_2_2_c": -2.0, "h_c": -2.0, "no2_c": 1.0}, "id": "NAR_syn", "gene_reaction_rule": "narB"}, {"subsystem": "Purine metabolism", "name": "Nucleoside-diphosphate kinase (ATP:GDP)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["NDPK1"]}, "metabolites": {"gtp_c": 1.0, "gdp_c": -1.0, "adp_c": 1.0, "atp_c": -1.0}, "id": "NDPK1", "gene_reaction_rule": "ndkR"}, {"subsystem": "Purine metabolism", "name": "Nucleoside-diphosphate kinase (ATP dIDP)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["NDPK10"]}, "metabolites": {"ditp_c": 1.0, "adp_c": 1.0, "atp_c": -1.0, "didp_c": -1.0}, "id": "NDPK10", "gene_reaction_rule": "ndkR"}, {"subsystem": "Pyrimidine metabolism", "name": "Nucleoside-diphosphate kinase (ATP:UDP)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["NDPK2"]}, "metabolites": {"utp_c": 1.0, "udp_c": -1.0, "adp_c": 1.0, "atp_c": -1.0}, "id": "NDPK2", "gene_reaction_rule": "ndkR"}, {"subsystem": "Pyrimidine metabolism", "name": "Nucleoside-diphosphate kinase (ATP:CDP)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["NDPK3"]}, "metabolites": {"cdp_c": -1.0, "ctp_c": 1.0, "atp_c": -1.0, "adp_c": 1.0}, "id": "NDPK3", "gene_reaction_rule": "ndkR"}, {"subsystem": "Pyrimidine metabolism", "name": "Nucleoside-diphosphate kinase (ATP:dTDP)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["NDPK4"]}, "metabolites": {"dttp_c": 1.0, "dtdp_c": -1.0, "atp_c": -1.0, "adp_c": 1.0}, "id": "NDPK4", "gene_reaction_rule": "ndkR"}, {"subsystem": "Purine metabolism", "name": "Nucleoside-diphosphate kinase 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0.0, "notes": {"original_bigg_ids": ["PHYTEDH1"]}, "metabolites": {"phytoe_c": -1.0, "nad_c": -1.0, "nadh_c": 1.0, "h_c": 1.0, "phytof_c": 1.0}, "id": "PHYTEDH1", "gene_reaction_rule": "pds"}, {"subsystem": "Carotenoid Biosynthesis", "name": "Phytoene dehydrogenase(2)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["PHYTEDH2"]}, "metabolites": {"phytoe_c": -1.0, "nadp_c": -1.0, "nadph_c": 1.0, "h_c": 1.0, "phytof_c": 1.0}, "id": "PHYTEDH2", "gene_reaction_rule": "pds"}, {"subsystem": "Carotenoid Biosynthesis", "name": "Geranylgeranyl-diphosphate geranylgeranyl-diphosphate geranylgeranyltransferase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["PHYTES"]}, "metabolites": {"ggdp_c": -2.0, "ppi_c": 1.0, "prephytedp_c": 1.0}, "id": "PHYTES", "gene_reaction_rule": "pys"}, {"subsystem": "Carotenoid Biosynthesis", "name": "Prephytoene diphosphate geranylgeranyl-diphosphategeranylgeranyltransferase", "upper_bound": 1000.0, 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"gene_reaction_rule": "panC_kcy"}, {"subsystem": "Porphyrin and chlorophyll metabolism", "name": "Uroporphyrinogen methyltransferase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["UPP3MT"]}, "metabolites": {"amet_c": -2.0, "dscl_c": 1.0, "ahcys_c": 2.0, "h_c": 1.0, "uppg3_c": -1.0}, "id": "UPP3MT", "gene_reaction_rule": "cysG"}, {"subsystem": "Porphyrin and chlorophyll metabolism", "name": "Uroporphyrinogen-III synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["UPP3S"]}, "metabolites": {"h2o_c": 1.0, "hmbil_c": -1.0, "uppg3_c": 1.0}, "id": "UPP3S", "gene_reaction_rule": "hemD"}, {"subsystem": "Porphyrin and chlorophyll metabolism", "name": "Uroporphyrinogen decarboxylase (uroporphyrinogen III)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["UPPDC1"]}, "metabolites": {"co2_c": 4.0, "cpppg3_c": 1.0, "uppg3_c": -1.0, "h_c": -4.0}, "id": "UPPDC1", "gene_reaction_rule": "hemE"}, {"subsystem": "Porphyrin and chlorophyll metabolism", "name": "Uroporphyrinogen decarboxylase (uroporphyrinogen I)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["UPPDC2"]}, "metabolites": {"uppg1_c": -1.0, "cpppg1_c": 1.0, "co2_c": 4.0, "h_c": -4.0}, "id": "UPPDC2", "gene_reaction_rule": "hemE"}, {"subsystem": "Pyrimidine metabolism", "name": "Uracil phosphoribosyltransferase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["UPPRT"]}, "metabolites": {"ura_c": -1.0, "ppi_c": 1.0, "prpp_c": -1.0, "ump_c": 1.0}, "id": "UPPRT", "gene_reaction_rule": "upp or pyrR"}, {"subsystem": "Purine metabolism", "name": "Urease", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["UREA"]}, "metabolites": {"urea_c": -1.0, "h2o_c": -1.0, "co2_c": 1.0, "nh4_c": 2.0, "h_c": -2.0}, "id": "UREA", "gene_reaction_rule": "ureA and ureB and ureC and ureD and ureE and ureF and ureG"}, {"subsystem": "Pyrimidine metabolism", "name": "Uridylate kinase (dUMP)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["URIDK2r"]}, "metabolites": {"dudp_c": 1.0, "dump_c": -1.0, "atp_c": -1.0, "adp_c": 1.0}, "id": "URIDK2r", "gene_reaction_rule": "slr0379"}, {"subsystem": "Lipopolysaccharide biosynthesis", "name": "UDP-sugar hydrolase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["USHD"]}, "metabolites": {"ump_c": 1.0, "h2o_c": -1.0, "h_c": 2.0, "lipidX_c": 1.0, "u23ga_c": -1.0}, "id": "USHD", "gene_reaction_rule": ""}, {"subsystem": "Valine leucine and isoleucine biosynthesis", "name": "Valine transaminase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["VALTA"]}, "metabolites": {"akg_c": -1.0, "glu__L_c": 1.0, "val__L_c": -1.0, "3mob_c": 1.0}, "id": "VALTA", "gene_reaction_rule": "ilvE"}, {"subsystem": "Valine leucine and isoleucine biosynthesis", "name": "Valyl-tRNA synthetase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["VALTRS"]}, "metabolites": {"valtrna_c": 1.0, "atp_c": -1.0, "ppi_c": 1.0, "amp_c": 1.0, "trnaval_c": -1.0, "val__L_c": -1.0}, "id": "VALTRS", "gene_reaction_rule": "valS"}, {"subsystem": "Carotenoid Biosynthesis", "name": "Zeta-carotene desaturase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ZCAROTDH1"]}, "metabolites": {"o2_c": -1.0, "h2o_c": 2.0, "neuspn_c": 1.0, "nadph_c": -1.0, "nadp_c": 1.0, "h_c": -1.0, "zcarote_c": -1.0}, "id": "ZCAROTDH1", "gene_reaction_rule": "crtQ"}, {"subsystem": "Carotenoid Biosynthesis", "name": "Zeta-carotene desaturase(2)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ZCAROTDH2"]}, "metabolites": {"o2_c": -1.0, "h2o_c": 2.0, "nadp_c": 1.0, "nadph_c": -1.0, "lycop_c": 1.0, "neuspn_c": -1.0, "h_c": -1.0}, "id": "ZCAROTDH2", "gene_reaction_rule": "crtQ"}, {"subsystem": "Nitrogen metabolism", "name": "Asparagine synthase (glutamine-hydrolysing)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ASNS1"]}, "metabolites": {"asn__L_c": 1.0, "atp_c": -1.0, "asp__L_c": -1.0, "glu__L_c": 1.0, "h2o_c": -1.0, "amp_c": 1.0, "gln__L_c": -1.0, "ppi_c": 1.0, "h_c": 1.0}, "id": "ASNS1", "gene_reaction_rule": ""}, {"subsystem": "Pyrimidine metabolism", "name": "Thymidylate synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["TMDS"]}, "metabolites": {"dump_c": -1.0, "dtmp_c": 1.0, "dhf_c": 1.0, "mlthf_c": -1.0}, "id": "TMDS", "gene_reaction_rule": "sll1635"}, {"subsystem": "Others", "name": "L-glutamate 5-semialdehyde dehydratase (spontaneous)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["G5SADs"]}, "metabolites": {"1pyr5c_c": 1.0, "glu5sa_c": -1.0, "h2o_c": 1.0, "h_c": 1.0}, "id": "G5SADs", "gene_reaction_rule": ""}, {"subsystem": "Sulfur Cysteine and methionine metabolism", "name": "3',5'-bisphosphate nucleotidase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["BPNT"]}, "metabolites": {"h2o_c": -1.0, "pi_c": 1.0, "pap_c": -1.0, "amp_c": 1.0}, "id": "BPNT", "gene_reaction_rule": "cysQ"}, {"subsystem": "Terpenoid backbone biosynthesis", "name": "Dimethylallyltranstransferase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DMATT"]}, "metabolites": {"dmpp_c": -1.0, "ppi_c": 1.0, "ipdp_c": -1.0, "grdp_c": 1.0}, "id": "DMATT", "gene_reaction_rule": "crtE"}, {"subsystem": "Others", "name": "Cystathionine b-lyase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["CYSTL"]}, "metabolites": {"hcys__L_c": 1.0, "pyr_c": 1.0, "h2o_c": -1.0, "cyst__L_c": -1.0, "nh4_c": 1.0}, "id": "CYSTL", "gene_reaction_rule": ""}, {"subsystem": "Folate biosynthesis", "name": "4-amino-4-deoxychorismate synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ADCS"]}, "metabolites": {"chor_c": -1.0, "4adcho_c": 1.0, "glu__L_c": 1.0, "gln__L_c": -1.0}, "id": "ADCS", "gene_reaction_rule": ""}, {"subsystem": "Folate biosynthesis", "name": "4-aminobenzoate synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ADCL"]}, "metabolites": {"pyr_c": 1.0, "4adcho_c": -1.0, "4abz_c": 1.0, "h_c": 1.0}, "id": "ADCL", "gene_reaction_rule": "slr0887"}, {"subsystem": "Others", "name": "2-Oxo-4-methyl-3-carboxypentanoate decarboxylation", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["OMCDC"]}, "metabolites": {"3c4mop_c": -1.0, "co2_c": 1.0, "4mop_c": 1.0, "h_c": -1.0}, "id": "OMCDC", "gene_reaction_rule": ""}, {"subsystem": "Valine leucine and isoleucine biosynthesis", "name": "2-isopropylmalate hydratase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["IPPMIb"]}, "metabolites": {"2ippm_c": -1.0, "h2o_c": -1.0, "3c3hmp_c": 1.0}, "id": "IPPMIb", "gene_reaction_rule": "leuC and leuD"}, {"subsystem": "Valine leucine and isoleucine biosynthesis", "name": "2-aceto-2-hydroxybutanoate synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ACHBS"]}, "metabolites": {"2ahbut_c": 1.0, "pyr_c": -1.0, "2obut_c": -1.0, "co2_c": 1.0, "h_c": -1.0}, "id": "ACHBS", "gene_reaction_rule": "ilvB and ilvG and ilvN"}, {"subsystem": "Terpenoid backbone biosynthesis", "name": "Geranylgeranyl diphosphate reductase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["GGDPR"]}, "metabolites": {"phdp_c": 1.0, "ggdp_c": -1.0, "nadp_c": 3.0, "nadph_c": -3.0, "h_c": -3.0}, "id": "GGDPR", "gene_reaction_rule": "sll1091"}, {"subsystem": "Peptidoglycan biosynthesis", "name": "Undecaprenyl-diphosphatase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["UDCPDP"]}, "metabolites": {"udcpdp_c": -1.0, "h2o_c": -1.0, "pi_c": 1.0, "h_c": 1.0, "udcpp_c": 1.0}, "id": "UDCPDP", "gene_reaction_rule": "sll0210"}, {"subsystem": "Peptidoglycan biosynthesis", "name": "UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine synthetase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["UGMDDS"]}, "metabolites": {"atp_c": -1.0, "h_c": 1.0, "adp_c": 1.0, "ugmda_c": 1.0, "pi_c": 1.0, "alaala_c": -1.0, "ugmd_c": -1.0}, "id": "UGMDDS", "gene_reaction_rule": "murF"}, {"subsystem": "Nitrogen metabolism", "name": "Cyanate aminohydrolase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["CYNTAH"]}, "metabolites": {"hco3_c": -1.0, "cynt_c": -1.0, "co2_c": 2.0, "nh4_c": 1.0, "h_c": -3.0}, "id": "CYNTAH", "gene_reaction_rule": "cynS"}, {"subsystem": "Ubiquinone and other pterpenoids biosynthesis", "name": "2-succinyl-6-hydroxy-2,4-cyclohexadiene 1-carboxylate synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["SHCHCS2"]}, "metabolites": {"thmpp_c": 1.0, "pyr_c": 1.0, "2shchc_c": 1.0, "ssaltpp_c": -1.0, "ichor_c": -1.0}, "id": "SHCHCS2", "gene_reaction_rule": "menD"}, {"subsystem": "Ubiquinone and other pterpenoids biosynthesis", "name": "1,4-dihydroxy-2-naphthoate phytyltransferase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DHNAPHT"]}, "metabolites": {"dhna_c": -1.0, "fdxo_2_2_c": -2.0, "ppi_c": 1.0, "phdp_c": -1.0, "fdxr_2_2_c": 2.0, "h_c": 1.0, "co2_c": 1.0, "dmtphllqne_c": 1.0}, "id": "DHNAPHT", "gene_reaction_rule": "menA"}, {"subsystem": "Ubiquinone and other pterpenoids biosynthesis", "name": "Demethylphylloquinone methyltransferase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DMTPHT"]}, "metabolites": {"phllqne_c": 1.0, "amet_c": -1.0, "ahcys_c": 1.0, "dmtphllqne_c": -1.0, "h_c": 1.0}, "id": "DMTPHT", "gene_reaction_rule": "gerCb"}, {"subsystem": "Transport", "name": "O2 transport via diffusion (periplasm)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["O2tc"]}, "metabolites": {"o2_c": 1.0, "o2_p": -1.0}, "id": "O2tpp", "gene_reaction_rule": ""}, {"subsystem": "Transport", "name": "O2 transport (diffusion), lumen", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["O2tu"]}, "metabolites": {"o2_c": 1.0, "o2_u": -1.0}, "id": "O2tu", "gene_reaction_rule": ""}, {"subsystem": "Transport", "name": "D-glucose transport in via proton symport (periplasm)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["GLCt2pp"]}, "metabolites": {"glc__D_c": 1.0, "glc__D_p": -1.0, "h_c": 1.0, "h_p": -1.0}, "id": "GLCt2pp", "gene_reaction_rule": "glcP"}, {"subsystem": "Transport", "name": "Glucose transport via diffusion (extracellular to periplasm)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["GLCtex"]}, "metabolites": {"glc__D_p": 1.0, "glc__D_e": -1.0}, "id": "GLCtex", "gene_reaction_rule": ""}, {"subsystem": "Transport", "name": "D-fructose transport in via proton symport (periplasm)", "upper_bound": 1000.0, 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{"original_bigg_ids": ["slr1784"]}, "name": "bvdR", "id": "bvdR"}, {"notes": {"original_bigg_ids": ["slr1993"]}, "name": "thl", "id": "thl"}, {"notes": {"original_bigg_ids": ["slr1364"]}, "name": "bioB", "id": "bioB"}, {"notes": {"original_bigg_ids": ["sll1987"]}, "name": "katG", "id": "katG"}, {"notes": {"original_bigg_ids": ["sll1317"]}, "name": "petA", "id": "petA"}, {"notes": {"original_bigg_ids": ["slr1878"]}, "name": "cpcE", "id": "cpcE"}, {"notes": {"original_bigg_ids": ["smr0003"]}, "name": "petM", "id": "petM"}, {"notes": {"original_bigg_ids": ["sll0199"]}, "name": "petE", "id": "petE"}, {"notes": {"original_bigg_ids": ["sll1182", "sll1316", "slr1185"]}, "name": "petC", "id": "petC"}, {"notes": {"original_bigg_ids": ["slr1986"]}, "name": "apcB", "id": "apcB"}, {"notes": {"original_bigg_ids": ["ssl3093"]}, "name": "cpcD", "id": "cpcD"}, {"notes": {"original_bigg_ids": ["slr2051", "sll1471"]}, "name": "cpcG", "id": "cpcG"}, {"notes": {"original_bigg_ids": ["sll1051"]}, "name": 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{"notes": {"original_bigg_ids": ["slr1237"]}, "name": "codA", "id": "codA"}, {"notes": {"original_bigg_ids": ["sll1443"]}, "name": "pyrG", "id": "pyrG"}, {"notes": {"original_bigg_ids": ["slr1138", "slr2083"]}, "name": "ctaE", "id": "ctaE"}, {"notes": {"original_bigg_ids": ["slr2082", "slr1137"]}, "name": "ctaD", "id": "ctaD"}, {"notes": {"original_bigg_ids": ["slr1136", "sll0813"]}, "name": "ctaC", "id": "ctaC"}, {"notes": {"original_bigg_ids": ["slr2001"]}, "name": "slr2001", "id": "slr2001"}, {"notes": {"original_bigg_ids": ["slr2002"]}, "name": "slr2002", "id": "slr2002"}, {"notes": {"original_bigg_ids": ["slr0260"]}, "name": "cobA", "id": "cobA"}, {"notes": {"original_bigg_ids": ["slr1842"]}, "name": "cysK", "id": "cysK"}, {"notes": {"original_bigg_ids": ["sll0712"]}, "name": "cysM", "id": "cysM"}, {"notes": {"original_bigg_ids": ["slr0958"]}, "name": "cysS", "id": "cysS"}, {"notes": {"original_bigg_ids": ["slr1379"]}, "name": "cydA", "id": "cydA"}, {"notes": {"original_bigg_ids": 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"name": "hisH", "id": "hisH"}, {"notes": {"original_bigg_ids": ["sll1893"]}, "name": "hisF", "id": "hisF"}, {"notes": {"original_bigg_ids": ["slr0500"]}, "name": "hisB", "id": "hisB"}, {"notes": {"original_bigg_ids": ["slr0546"]}, "name": "trpC", "id": "trpC"}, {"notes": {"original_bigg_ids": ["slr0032"]}, "name": "ilvE", "id": "ilvE"}, {"notes": {"original_bigg_ids": ["sll1362"]}, "name": "ileS", "id": "ileS"}, {"notes": {"original_bigg_ids": ["slr1722"]}, "name": "guaB", "id": "guaB"}, {"notes": {"original_bigg_ids": ["sll1556"]}, "name": "sll1556", "id": "sll1556"}, {"notes": {"original_bigg_ids": ["slr1517"]}, "name": "leuB", "id": "leuB"}, {"notes": {"original_bigg_ids": ["sll1444"]}, "name": "leuD", "id": "leuD"}, {"notes": {"original_bigg_ids": ["sll1470"]}, "name": "leuC", "id": "leuC"}, {"notes": {"original_bigg_ids": ["sll1564", "slr0186"]}, "name": "leuA", "id": "leuA"}, {"notes": {"original_bigg_ids": ["sll1363"]}, "name": "ilvC", "id": "ilvC"}, {"notes": {"original_bigg_ids": ["slr1511"]}, "name": "fabH", "id": "fabH"}, {"notes": {"original_bigg_ids": ["sll1074"]}, "name": "leuS", "id": "leuS"}, {"notes": {"original_bigg_ids": ["slr0015"]}, "name": "lpxB", "id": "lpxB"}, {"notes": {"original_bigg_ids": ["sll1683"]}, "name": "cad", "id": "cad"}, {"notes": {"original_bigg_ids": ["slr1550"]}, "name": "lysS", "id": "lysS"}, {"notes": {"original_bigg_ids": ["sll1676"]}, "name": "malQ", "id": "malQ"}, {"notes": {"original_bigg_ids": ["sll1558"]}, "name": "sll1558", "id": "sll1558"}, {"notes": {"original_bigg_ids": ["sll1496"]}, "name": "sll1496", "id": "sll1496"}, {"notes": {"original_bigg_ids": ["slr2074"]}, "name": "manA", "id": "manA"}, {"notes": {"original_bigg_ids": ["slr0493", "sll1370", "Slr0493"]}, "name": "rfbM", "id": "rfbM"}, {"notes": {"original_bigg_ids": ["slr2023"]}, "name": "fabD", "id": "fabD"}, {"notes": {"original_bigg_ids": ["sll0891"]}, "name": "citH", "id": "citH"}, {"notes": {"original_bigg_ids": ["slr0721"]}, "name": "me", "id": "me"}, {"notes": {"original_bigg_ids": ["slr2136"]}, "name": "gcpE", "id": "gcpE"}, {"notes": {"original_bigg_ids": ["slr1542"]}, "name": "slr1542", "id": "slr1542"}, {"notes": {"original_bigg_ids": ["slr0951"]}, "name": "slr0951", "id": "slr0951"}, {"notes": {"original_bigg_ids": ["sll0927"]}, "name": "metX", "id": "metX"}, {"notes": {"original_bigg_ids": ["slr0212"]}, "name": "metH", "id": "metH"}, {"notes": {"original_bigg_ids": ["slr0649"]}, "name": "metS", "id": "metS"}, {"notes": {"original_bigg_ids": ["sll0036"]}, "name": "sll0036", "id": "sll0036"}, {"notes": {"original_bigg_ids": ["slr0381"]}, "name": "slr0381", "id": "slr0381"}, {"notes": {"original_bigg_ids": ["sll1383"]}, "name": "suhB", "id": "suhB"}, {"notes": {"original_bigg_ids": ["sll1722"]}, "name": "sll1722", "id": "sll1722"}, {"notes": {"original_bigg_ids": ["slr0526"]}, "name": "panB", "id": "panB"}, {"notes": {"original_bigg_ids": ["Sll0418"]}, "name": "sll0418", "id": "sll0418"}, {"notes": {"original_bigg_ids": ["slr1030"]}, "name": "chlI", "id": "chlI"}, {"notes": {"original_bigg_ids": ["slr1777"]}, "name": "chlD", "id": "chlD"}, {"notes": {"original_bigg_ids": ["slr1055"]}, "name": "chlH", "id": "chlH"}, {"notes": {"original_bigg_ids": ["sll1874"]}, "name": "AT103", "id": "AT103"}, {"notes": {"original_bigg_ids": ["sll1214"]}, "name": "sll1214", "id": "sll1214"}, {"notes": {"original_bigg_ids": ["slr0905"]}, "name": "bchE", "id": "bchE"}, {"notes": {"original_bigg_ids": ["slr0525"]}, "name": "chlM", "id": "chlM"}, {"notes": {"original_bigg_ids": ["sll0753"]}, "name": "folD", "id": "folD"}, {"notes": {"original_bigg_ids": ["sll0520"]}, "name": "ndhI", "id": "ndhI"}, {"notes": {"original_bigg_ids": ["sll8031"]}, "name": "None", "id": "sll8031"}, {"notes": {"original_bigg_ids": ["slr1623"]}, "name": "slr1623", "id": "slr1623"}, {"notes": {"original_bigg_ids": ["slr1291"]}, "name": "ndhD2", "id": "ndhD2"}, {"notes": {"original_bigg_ids": ["slr0844", "sll0026", "sll1732"]}, "name": "ndhF", "id": "ndhF"}, {"notes": {"original_bigg_ids": ["sll0519"]}, "name": "ndhA", "id": "ndhA"}, {"notes": {"original_bigg_ids": ["sll1262"]}, "name": "sll1262", "id": "sll1262"}, {"notes": {"original_bigg_ids": ["slr1279"]}, "name": "ndhC", "id": "ndhC"}, {"notes": {"original_bigg_ids": ["slr0261"]}, "name": "ndhH", "id": "ndhH"}, {"notes": {"original_bigg_ids": ["slr0331", "sll0027"]}, "name": "ndhD", "id": "ndhD"}, {"notes": {"original_bigg_ids": ["sll0223"]}, "name": "ndhB", "id": "ndhB"}, {"notes": {"original_bigg_ids": ["sll0521"]}, "name": "ndhG", "id": "ndhG"}, {"notes": {"original_bigg_ids": ["sll0522"]}, "name": "ndhE", "id": "ndhE"}, {"notes": {"original_bigg_ids": ["slr1280"]}, "name": "ndhK", "id": "ndhK"}, {"notes": {"original_bigg_ids": ["slr1281"]}, "name": "ndhJ", "id": "ndhJ"}, {"notes": {"original_bigg_ids": ["slr0851", "slr1743", "sll1484"]}, "name": "ndh", "id": "ndh"}, {"notes": {"original_bigg_ids": ["sll1415"]}, "name": "sll1415", "id": "sll1415"}, {"notes": {"original_bigg_ids": ["slr0400"]}, "name": "slr0400", "id": "slr0400"}, {"notes": {"original_bigg_ids": ["slr1691"]}, "name": "nadE", "id": "nadE"}, {"notes": {"original_bigg_ids": ["slr1434"]}, "name": "pntB", "id": "pntB"}, {"notes": {"original_bigg_ids": ["slr1239"]}, "name": "pntA", "id": "pntA"}, {"notes": {"original_bigg_ids": ["sll1454"]}, "name": "narB", "id": "narB"}, {"notes": {"original_bigg_ids": ["sll1852"]}, "name": "ndkR", "id": "ndkR"}, {"notes": {"original_bigg_ids": ["sll1916"]}, "name": "sll1916", "id": "sll1916"}, {"notes": {"original_bigg_ids": ["slr0787"]}, "name": "slr0787", "id": "slr0787"}, {"notes": {"original_bigg_ids": ["slr0936"]}, "name": "nadC", "id": "nadC"}, {"notes": {"original_bigg_ids": ["slr0788"]}, "name": "slr0788", "id": "slr0788"}, {"notes": {"original_bigg_ids": ["slr0898"]}, "name": "nirA", "id": "nirA"}, {"notes": {"original_bigg_ids": ["sll1127"]}, "name": "menB", "id": "menB"}, {"notes": {"original_bigg_ids": ["sll0398"]}, "name": "dgt", "id": "dgt"}, {"notes": {"original_bigg_ids": ["sll0902"]}, "name": "argF", "id": "argF"}, {"notes": {"original_bigg_ids": ["sll0838"]}, "name": "pyrF", "id": "pyrF"}, {"notes": {"original_bigg_ids": ["sll0936"]}, "name": "sll0936", "id": "sll0936"}, {"notes": {"original_bigg_ids": ["slr1099"]}, "name": "ubiX", "id": "ubiX"}, {"notes": {"original_bigg_ids": ["slr1653"]}, "name": "ama", "id": "ama"}, {"notes": {"original_bigg_ids": ["slr0185"]}, "name": "umpS", "id": "umpS"}, {"notes": {"original_bigg_ids": ["sll0603"]}, "name": "menD", "id": "menD"}, {"notes": {"original_bigg_ids": ["sll1561"]}, "name": "putA", "id": "putA"}, {"notes": {"original_bigg_ids": ["sll0657"]}, "name": "mraY", "id": "mraY"}, {"notes": {"original_bigg_ids": ["slr1791"]}, "name": "cysH", "id": "cysH"}, {"notes": {"original_bigg_ids": ["slr0239"]}, "name": "cbiF", "id": "cbiF"}, {"notes": {"original_bigg_ids": ["slr0969"]}, "name": "cbiH", "id": "cbiH"}, {"notes": {"original_bigg_ids": ["slr1879"]}, "name": "cbiL", "id": "cbiL"}, {"notes": {"original_bigg_ids": ["slr0252"]}, "name": "slr0252", "id": "slr0252"}, {"notes": {"original_bigg_ids": ["sll0099"]}, "name": "cbiE", "id": "cbiE"}, {"notes": {"original_bigg_ids": ["slr1467"]}, "name": "slr1467", "id": "slr1467"}, {"notes": {"original_bigg_ids": ["sll0916"]}, "name": "cbiC", "id": "cbiC"}, {"notes": {"original_bigg_ids": ["sll0794"]}, "name": "merR", "id": "merR"}, {"notes": {"original_bigg_ids": ["sll1721"]}, "name": "pdhB", "id": "pdhB"}, {"notes": {"original_bigg_ids": ["sll1841"]}, "name": "odhB", "id": "odhB"}, {"notes": {"original_bigg_ids": ["sll0741"]}, "name": "nifJ", "id": "nifJ"}, {"notes": {"original_bigg_ids": ["sll1440"]}, "name": "pdxH", "id": "pdxH"}, {"notes": {"original_bigg_ids": ["sll0660"]}, "name": "pdxA", "id": "pdxA"}, {"notes": {"original_bigg_ids": ["sll0745", "sll1196"]}, "name": "pfkA", "id": "pfkA"}, {"notes": {"original_bigg_ids": ["sll0726"]}, "name": "pgm", "id": "pgm"}, {"notes": {"original_bigg_ids": ["sll1758"]}, "name": "sll1758", "id": "sll1758"}, {"notes": {"original_bigg_ids": ["slr1349"]}, "name": "pgi", "id": "pgi"}, {"notes": {"original_bigg_ids": ["slr0394"]}, "name": "pgk", "id": "pgk"}, {"notes": {"original_bigg_ids": ["sll1479"]}, "name": "devB", "id": "devB"}, {"notes": {"original_bigg_ids": ["slr0458"]}, "name": "slr0458", "id": "slr0458"}, {"notes": {"original_bigg_ids": ["sll1349"]}, "name": "cbbZp", "id": "cbbZp"}, {"notes": {"original_bigg_ids": ["slr0395"]}, "name": "ntcB", "id": "ntcB"}, {"notes": {"original_bigg_ids": ["slr1124"]}, "name": "gpmB", "id": "gpmB"}, {"notes": {"original_bigg_ids": ["sll1522"]}, "name": "pgsA", "id": "pgsA"}, {"notes": {"original_bigg_ids": ["slr1830"]}, "name": "phbC", "id": "phbC"}, {"notes": {"original_bigg_ids": ["slr1829"]}, "name": "slr1829", "id": "slr1829"}, {"notes": {"original_bigg_ids": ["sll1553"]}, "name": "pheT", "id": "pheT"}, {"notes": {"original_bigg_ids": ["sll0454"]}, "name": "pheS", "id": "pheS"}, {"notes": {"original_bigg_ids": ["slr1254"]}, "name": "pds", "id": "pds"}, {"notes": {"original_bigg_ids": ["slr1334"]}, "name": "slr1334", "id": "slr1334"}, {"notes": {"original_bigg_ids": ["slr0812"]}, "name": "slr0812", "id": "slr0812"}, {"notes": {"original_bigg_ids": ["slr1622"]}, "name": "ppa", "id": "ppa"}, {"notes": {"original_bigg_ids": ["sll1994"]}, "name": "hemB", "id": "hemB"}, {"notes": {"original_bigg_ids": ["sll0920"]}, "name": "ppc", "id": "ppc"}, {"notes": {"original_bigg_ids": ["sll0250"]}, "name": "dfp", "id": "dfp"}, {"notes": {"original_bigg_ids": ["sll0290"]}, "name": "ppk", "id": "ppk"}, {"notes": {"original_bigg_ids": ["slr2081"]}, "name": "tyrA", "id": "tyrA"}, {"notes": {"original_bigg_ids": ["sll1662"]}, "name": "pheA", "id": "pheA"}, {"notes": {"original_bigg_ids": ["slr1790"]}, "name": "slr1790", "id": "slr1790"}, {"notes": {"original_bigg_ids": ["slr0301"]}, "name": "ppsA", "id": "ppsA"}, {"notes": {"original_bigg_ids": ["slr0488"]}, "name": "slr0488", "id": "slr0488"}, {"notes": {"original_bigg_ids": ["sll1833"]}, "name": "ftsI", "id": "ftsI"}, {"notes": {"original_bigg_ids": ["sll0506"]}, "name": "sll0506", "id": "sll0506"}, {"notes": {"original_bigg_ids": ["slr1159"]}, "name": "purD", "id": "purD"}, {"notes": {"original_bigg_ids": ["sll0356"]}, "name": "trpF", "id": "trpF"}, {"notes": {"original_bigg_ids": ["slr0838"]}, "name": "purM", "id": "purM"}, {"notes": {"original_bigg_ids": ["slr0608"]}, "name": "hisI", "id": "hisI"}, {"notes": {"original_bigg_ids": ["slr1226"]}, "name": "purC", "id": "purC"}, {"notes": {"original_bigg_ids": ["slr0520", "sll1056"]}, "name": "purL", "id": "purL"}, {"notes": {"original_bigg_ids": ["slr0652"]}, "name": "hisA", "id": "hisA"}, {"notes": {"original_bigg_ids": ["sll1425"]}, "name": "proS", "id": "proS"}, {"notes": {"original_bigg_ids": ["sll0469"]}, "name": "prsA", "id": "prsA"}, {"notes": {"original_bigg_ids": ["sll1525"]}, "name": "prk", "id": "prk"}, {"notes": {"original_bigg_ids": ["slr0444"]}, "name": "aroA", "id": "aroA"}, {"notes": {"original_bigg_ids": ["sll0629", "ssr0390"]}, "name": "psaK", "id": "psaK"}, {"notes": {"original_bigg_ids": ["slr1655"]}, "name": "psaL", "id": "psaL"}, {"notes": {"original_bigg_ids": ["slr0737"]}, "name": "psaD", "id": "psaD"}, {"notes": {"original_bigg_ids": ["smr0005"]}, "name": "psaM", "id": "psaM"}, {"notes": {"original_bigg_ids": ["ssl0563"]}, "name": "psaC", "id": "psaC"}, {"notes": {"original_bigg_ids": ["smr0004"]}, "name": "psaI", "id": "psaI"}, {"notes": {"original_bigg_ids": ["ssr2831"]}, "name": "psaE", "id": "psaE"}, {"notes": {"original_bigg_ids": ["sml0008"]}, "name": "psaJ", "id": "psaJ"}, {"notes": {"original_bigg_ids": ["slr1834"]}, "name": "psaA", "id": "psaA"}, {"notes": {"original_bigg_ids": ["slr1835"]}, "name": "psaB", "id": "psaB"}, {"notes": {"original_bigg_ids": ["sll0819"]}, "name": "psaF", "id": "psaF"}, {"notes": {"original_bigg_ids": ["smr0006"]}, "name": "psbF", "id": "psbF"}, {"notes": {"original_bigg_ids": ["sml0007"]}, "name": "ycf32", "id": "ycf32"}, {"notes": {"original_bigg_ids": ["slr1645"]}, "name": "psbZ", "id": "psbZ"}, {"notes": {"original_bigg_ids": ["slr1181"]}, "name": "psbA1", "id": "psbA1"}, {"notes": {"original_bigg_ids": ["ssl2598"]}, "name": "psbH", "id": "psbH"}, {"notes": {"original_bigg_ids": ["sll1418"]}, "name": "sll1418", "id": "sll1418"}, {"notes": {"original_bigg_ids": ["sml0002"]}, "name": "psbX", "id": "psbX"}, {"notes": {"original_bigg_ids": ["slr0927"]}, "name": "psbD2", "id": "psbD2"}, {"notes": {"original_bigg_ids": ["ssr3451"]}, "name": "psbE", "id": "psbE"}, {"notes": {"original_bigg_ids": ["sll1867"]}, "name": "psbA3", "id": "psbA3"}, {"notes": {"original_bigg_ids": ["sll1194"]}, "name": "psbU", "id": "psbU"}, {"notes": {"original_bigg_ids": ["slr1739"]}, "name": "slr1739", "id": "slr1739"}, {"notes": {"original_bigg_ids": ["slr0906"]}, "name": "psbB", "id": "psbB"}, {"notes": {"original_bigg_ids": ["sll0427"]}, "name": "psbO", "id": "psbO"}, {"notes": {"original_bigg_ids": ["slr1311"]}, "name": "psbA2", "id": "psbA2"}, {"notes": {"original_bigg_ids": ["sml0005"]}, "name": "psbK", "id": "psbK"}, {"notes": {"original_bigg_ids": ["sml0003"]}, "name": "psbM", "id": "psbM"}, {"notes": {"original_bigg_ids": ["sll0258"]}, "name": "psbV", "id": "psbV"}, {"notes": {"original_bigg_ids": ["sml0001"]}, "name": "psbI", "id": "psbI"}, {"notes": {"original_bigg_ids": ["sll1398"]}, "name": "psb13", "id": "psb13"}, {"notes": {"original_bigg_ids": ["smr0009"]}, "name": "psbN", "id": "psbN"}, {"notes": {"original_bigg_ids": ["smr0008"]}, "name": "psbJ", "id": "psbJ"}, {"notes": {"original_bigg_ids": ["sll0849"]}, "name": "psbD", "id": "psbD"}, {"notes": {"original_bigg_ids": ["sll0851"]}, "name": "psbC", "id": "psbC"}, {"notes": {"original_bigg_ids": ["smr0007"]}, "name": "psbL", "id": "psbL"}, {"notes": {"original_bigg_ids": ["slr2132"]}, "name": "pta", "id": "pta"}, {"notes": {"original_bigg_ids": ["sll1612"]}, "name": "folC", "id": "folC"}, {"notes": {"original_bigg_ids": ["slr0847"]}, "name": "kdtB", "id": "kdtB"}, {"notes": {"original_bigg_ids": ["sll0587", "sll1275"]}, "name": "pykF", "id": "pykF"}, {"notes": {"original_bigg_ids": ["sll0622"]}, "name": "nadA", "id": "nadA"}, {"notes": {"original_bigg_ids": ["sll1501"]}, "name": "cbiA", "id": "cbiA"}, {"notes": {"original_bigg_ids": ["slr0009"]}, "name": "rbcL", "id": "rbcL"}, {"notes": {"original_bigg_ids": ["slr0012"]}, "name": "rbcS", "id": "rbcS"}, {"notes": {"original_bigg_ids": ["sll1282"]}, "name": "ribH", "id": "ribH"}, {"notes": {"original_bigg_ids": ["sll0300"]}, "name": "ribC", "id": "ribC"}, {"notes": {"original_bigg_ids": ["slr1164"]}, "name": "nrdA", "id": "nrdA"}, {"notes": {"original_bigg_ids": ["slr0591"]}, "name": "slr0591", "id": "slr0591"}, {"notes": {"original_bigg_ids": ["sll0807"]}, "name": "cfxE", "id": "cfxE"}, {"notes": {"original_bigg_ids": ["slr0194"]}, "name": "rpiA", "id": "rpiA"}, {"notes": {"original_bigg_ids": ["ssl2153"]}, "name": "rpiB", "id": "rpiB"}, {"notes": {"original_bigg_ids": ["slr1165"]}, "name": "met3", "id": "met3"}, {"notes": {"original_bigg_ids": ["sll0938"]}, "name": "sll0938", "id": "sll0938"}, {"notes": {"original_bigg_ids": ["sll1336"]}, "name": "sll1336", "id": "sll1336"}, {"notes": {"original_bigg_ids": ["slr2072"]}, "name": "ilvA", "id": "ilvA"}, {"notes": {"original_bigg_ids": ["slr1348"]}, "name": "cysE", "id": "cysE"}, {"notes": {"original_bigg_ids": ["slr1703"]}, "name": "serS", "id": "serS"}, {"notes": {"original_bigg_ids": ["slr1559"]}, "name": "aroE", "id": "aroE"}, {"notes": {"original_bigg_ids": ["sll1669"]}, "name": "aroK", "id": "aroK"}, {"notes": {"original_bigg_ids": ["sll1559"]}, "name": "sll1559", "id": "sll1559"}, {"notes": {"original_bigg_ids": ["slr1020"]}, "name": "sqdB", "id": "sqdB"}, {"notes": {"original_bigg_ids": ["slr0384"]}, "name": "slr0384", "id": "slr0384"}, {"notes": {"original_bigg_ids": ["slr0370"]}, "name": "gabD", "id": "gabD"}, {"notes": {"original_bigg_ids": ["slr0492"]}, "name": "menE", "id": "menE"}, {"notes": {"original_bigg_ids": ["sll0409"]}, "name": "sll0409", "id": "sll0409"}, {"notes": {"original_bigg_ids": ["slr1233"]}, "name": "frdA", "id": "frdA"}, {"notes": {"original_bigg_ids": ["sll1625", "sll0823"]}, "name": "sdhB", "id": "sdhB"}, {"notes": {"original_bigg_ids": ["sll1557"]}, "name": "sucD", "id": "sucD"}, {"notes": {"original_bigg_ids": ["sll1023"]}, "name": "sucC", "id": "sucC"}, {"notes": {"original_bigg_ids": ["slr0963"]}, "name": "sir", "id": "sir"}, {"notes": {"original_bigg_ids": ["slr1793"]}, "name": "talB", "id": "talB"}, {"notes": {"original_bigg_ids": ["slr1933", "slr0985"]}, "name": "rfbC", "id": "rfbC"}, {"notes": {"original_bigg_ids": ["slr0809", "slr0836"]}, "name": "rfbB", "id": "rfbB"}, {"notes": {"original_bigg_ids": ["sll1172", "sll1688"]}, "name": "thrC", "id": "thrC"}, {"notes": {"original_bigg_ids": ["sll0078"]}, "name": "thrS", "id": "thrS"}, {"notes": 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"formula": "C27H47N2O9PRS", "compartment": "c", "id": "3ocpalm9eACP_c"}, {"name": "3-Oxooctadecanoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3ooctdACP_c"]}, "charge": -1, "formula": "C29H53N2O9PRS", "compartment": "c", "id": "3ooctdACP_c"}, {"name": "3-oxo-cis-vacc-11-enoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3ocvac11eACP_c"]}, "charge": -1, "formula": "C29H51N2O9PRS", "compartment": "c", "id": "3ocvac11eACP_c"}, {"name": "Acetoacetyl-ACP", "notes": {"original_bigg_ids": ["actACP_c"]}, "charge": -1, "formula": "C15H25N2O9PRS", "compartment": "c", "id": "actACP_c"}, {"name": "3-Oxohexanoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3ohexACP_c"]}, "charge": -1, "formula": "C17H29N2O9PRS", "compartment": "c", "id": "3ohexACP_c"}, {"name": "3-Oxooctanoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3ooctACP_c"]}, "charge": -1, "formula": "C19H33N2O9PRS", "compartment": "c", "id": "3ooctACP_c"}, {"name": "Malonyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["malACP_c"]}, "charge": -2, "formula": "C14H22N2O10PRS", "compartment": "c", "id": "malACP_c"}, {"name": "Octanoyl-ACP (n-C8:0ACP)", "notes": {"original_bigg_ids": ["ocACP_c"]}, "charge": -1, "formula": "C19H35N2O8PRS", "compartment": "c", "id": "ocACP_c"}, {"name": "Acyl carrier protein", "notes": {"original_bigg_ids": ["ACP_c"]}, "charge": -1, "formula": "C11H21N2O7PRS", "compartment": "c", "id": "ACP_c"}, {"name": "Decanoyl-ACP (n-C10:0ACP)", "notes": {"original_bigg_ids": ["dcaACP_c"]}, "charge": -1, "formula": "C21H39N2O8PRS", "compartment": "c", "id": "dcaACP_c"}, {"name": "Cis-dec-3-enoyl-[acyl-carrier protein] (n-C10:1)", "notes": {"original_bigg_ids": ["cdec3eACP_c"]}, "charge": -1, "formula": "C21H37N2O8PRS", "compartment": "c", "id": "cdec3eACP_c"}, {"name": "Dodecanoyl-ACP (n-C12:0ACP)", "notes": {"original_bigg_ids": ["ddcaACP_c"]}, "charge": -1, "formula": "C23H43N2O8PRS", "compartment": "c", "id": "ddcaACP_c"}, {"name": "Cis-dodec-5-enoyl-[acyl-carrier protein] (n-C12:1)", "notes": {"original_bigg_ids": ["cddec5eACP_c"]}, "charge": -1, "formula": "C23H41N2O8PRS", "compartment": "c", "id": "cddec5eACP_c"}, {"name": "Myristoyl-ACP (n-C14:0ACP)", "notes": {"original_bigg_ids": ["myrsACP_c"]}, "charge": -1, "formula": "C25H47N2O8PRS", "compartment": "c", "id": "myrsACP_c"}, {"name": "Cis-tetradec-7-enoyl-[acyl-carrier protein] (n-C14:1)", "notes": {"original_bigg_ids": ["tdeACP_c"]}, "charge": -1, "formula": "C25H45N2O8PRS", "compartment": "c", "id": "tdeACP_c"}, {"name": "Palmitoyl-ACP (n-C16:0ACP)", "notes": {"original_bigg_ids": ["palmACP_c"]}, "charge": -1, "formula": "C27H51N2O8PRS", "compartment": "c", "id": "palmACP_c"}, {"name": "Cis-hexadec-9-enoyl-[acyl-carrier protein] (n-C16:1)", "notes": {"original_bigg_ids": ["hdeACP_c"]}, "charge": -1, "formula": "C27H49N2O8PRS", "compartment": "c", "id": "hdeACP_c"}, {"name": "Butyryl-ACP (n-C4:0ACP)", "notes": {"original_bigg_ids": ["butACP_c"]}, "charge": -1, "formula": "C15H27N2O8PRS", "compartment": "c", "id": "butACP_c"}, {"name": "Hexanoyl-ACP (n-C6:0ACP)", "notes": {"original_bigg_ids": ["hexACP_c"]}, "charge": -1, "formula": "C17H31N2O8PRS", "compartment": "c", "id": "hexACP_c"}, {"name": "Acetoacetyl-CoA", "notes": {"original_bigg_ids": ["aacoa_c"]}, "charge": -4, "formula": "C25H36N7O18P3S", "compartment": "c", "id": "aacoa_c"}, {"name": "(R)-3-Hydroxybutyryl-CoA", "notes": {"original_bigg_ids": ["3hbcoa_DASH_R_c"]}, "charge": -4, "formula": "C25H38N7O18P3S", "compartment": "c", "id": "3hbcoa__R_c"}, {"name": "4-Aminobutanal", "notes": {"original_bigg_ids": ["4abutn_c"]}, "charge": 1, "formula": "C4H10NO", "compartment": "c", "id": "4abutn_c"}, {"name": "4-Aminobutanoate", "notes": {"original_bigg_ids": ["4abut_c"]}, "charge": 0, "formula": "C4H9NO2", "compartment": "c", "id": "4abut_c"}, {"name": "Adenosyl cobinamide phosphate", "notes": {"original_bigg_ids": ["adocbip_c"]}, "charge": -1, "formula": "C58H83CoN16O14P", "compartment": "c", "id": "adocbip_c"}, {"name": "GTP", "notes": {"original_bigg_ids": ["gtp_c"]}, "charge": -4, "formula": "C10H12N5O14P3", "compartment": "c", "id": "gtp_c"}, {"name": "Adenosine-GDP-cobinamide", "notes": {"original_bigg_ids": ["agdpcbi_c"]}, "charge": -1, "formula": "C68H95CoN21O21P2", "compartment": "c", "id": "agdpcbi_c"}, {"name": "Diphosphate", "notes": {"original_bigg_ids": ["ppi_c"]}, "charge": -3, "formula": "HO7P2", "compartment": "c", "id": "ppi_c"}, {"name": "Acetyl-CoA", "notes": {"original_bigg_ids": ["accoa_c"]}, "charge": -4, "formula": "C23H34N7O17P3S", "compartment": "c", "id": "accoa_c"}, {"name": "Bicarbonate", "notes": {"original_bigg_ids": ["hco3_c"]}, "charge": -1, "formula": "CHO3", "compartment": "c", "id": "hco3_c"}, {"name": "Malonyl-CoA", "notes": {"original_bigg_ids": ["malcoa_c"]}, "charge": -5, "formula": "C24H33N7O19P3S", "compartment": "c", "id": "malcoa_c"}, {"name": "Phosphate", "notes": {"original_bigg_ids": 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"charge": -2, "formula": "C34H38N4O4", "compartment": "c", "id": "pppg9_c"}, {"name": "Cytosine", "notes": {"original_bigg_ids": ["csn_c"]}, "charge": 0, "formula": "C4H5N3O", "compartment": "c", "id": "csn_c"}, {"name": "Uracil", "notes": {"original_bigg_ids": ["ura_c"]}, "charge": 0, "formula": "C4H4N2O2", "compartment": "c", "id": "ura_c"}, {"name": "UTP", "notes": {"original_bigg_ids": ["utp_c"]}, "charge": -4, "formula": "C9H11N2O15P3", "compartment": "c", "id": "utp_c"}, {"name": "CTP", "notes": {"original_bigg_ids": ["ctp_c"]}, "charge": -4, "formula": "C9H12N3O14P3", "compartment": "c", "id": "ctp_c"}, {"name": "O2", "notes": {"original_bigg_ids": ["o2_u"]}, "charge": 0, "formula": "O2", "compartment": "u", "id": "o2_u"}, {"name": "H2O", "notes": {"original_bigg_ids": ["h2o_u"]}, "charge": 0, "formula": "H2O", "compartment": "u", "id": "h2o_u"}, {"name": "O2", "notes": {"original_bigg_ids": ["o2_p"]}, "charge": 0, "formula": "O2", "compartment": "p", "id": "o2_p"}, {"name": "H2O", "notes": {"original_bigg_ids": ["h2o_p"]}, "charge": 0, "formula": "H2O", "compartment": "p", "id": "h2o_p"}, {"name": "Cyanophycin (multi-Larginyl-poli [L--aspartic acid]) polimer (n+2)", "notes": {"original_bigg_ids": ["cyanphy_c"]}, "charge": 0, "formula": "C10H17N5O4R", "compartment": "c", "id": "cyanphy_c"}, {"name": "Cyanophycin (multi-Larginyl-poli [L--aspartic acid]) polimer (n)", "notes": {"original_bigg_ids": ["precyanphy_c"]}, "charge": 0, "formula": "R", "compartment": "c", "id": "precyanphy_c"}, {"name": "Cob(I)yrinate a,c diamide", "notes": {"original_bigg_ids": ["co1dam_c"]}, "charge": -5, "formula": "C45H56CoN6O12", "compartment": "c", "id": "co1dam_c"}, {"name": "Inorganic triphosphate", "notes": {"original_bigg_ids": ["pppi_c"]}, "charge": -4, "formula": "HO10P3", "compartment": "c", "id": "pppi_c"}, {"name": "O-Acetyl-L-serine", "notes": {"original_bigg_ids": ["acser_c"]}, "charge": 0, "formula": "C5H9NO4", "compartment": "c", "id": "acser_c"}, {"name": "Hydrogen sulfide", "notes": {"original_bigg_ids": ["h2s_c"]}, "charge": 0, "formula": "H2S", "compartment": "c", "id": "h2s_c"}, {"name": "L-Cysteine", "notes": {"original_bigg_ids": ["cys_DASH_L_c"]}, "charge": 0, "formula": "C3H7NO2S", "compartment": "c", "id": "cys__L_c"}, {"name": "Mercaptopyruvate", "notes": {"original_bigg_ids": ["mercppyr_c"]}, "charge": -1, "formula": "C3H3O3S", "compartment": "c", "id": "mercppyr_c"}, {"name": "TRNA(Cys)", "notes": {"original_bigg_ids": ["trnacys_c"]}, "charge": 0, "formula": "R", "compartment": "c", "id": "trnacys_c"}, {"name": "L-Cysteinyl-tRNA(Cys)", "notes": {"original_bigg_ids": ["cystrna_c"]}, "charge": 1, "formula": "C3H6NOSR", "compartment": "c", "id": "cystrna_c"}, {"name": "CMP", "notes": {"original_bigg_ids": ["cmp_c"]}, "charge": -2, "formula": "C9H12N3O8P", "compartment": "c", "id": "cmp_c"}, {"name": "CDP", "notes": {"original_bigg_ids": ["cdp_c"]}, "charge": -3, "formula": "C9H12N3O11P2", "compartment": "c", "id": "cdp_c"}, {"name": "Meso-2,6-Diaminoheptanedioate", "notes": {"original_bigg_ids": ["26dap_DASH_M_c"]}, "charge": 0, "formula": "C7H14N2O4", "compartment": "c", "id": "26dap__M_c"}, {"name": "L-Lysine", "notes": {"original_bigg_ids": ["lys_DASH_L_c"]}, "charge": 1, "formula": "C6H15N2O2", "compartment": "c", "id": "lys__L_c"}, {"name": "LL-2,6-Diaminoheptanedioate", "notes": {"original_bigg_ids": ["26dap_DASH_LL_c"]}, "charge": 0, "formula": "C7H14N2O4", "compartment": "c", "id": "26dap_LL_c"}, {"name": "CDP-1,2-dihexadecanoylglycerol", "notes": {"original_bigg_ids": ["cdpdhdecg_c"]}, "charge": -2, "formula": "C44H79N3O15P2", "compartment": "c", "id": "cdpdhdecg_c"}, {"name": "CDP-1,2-dihexadec-9-enoylglycerol", "notes": {"original_bigg_ids": ["cdpdhdec9eg_c"]}, "charge": -2, "formula": "C44H75N3O15P2", "compartment": "c", "id": "cdpdhdec9eg_c"}, {"name": "CDP-1,2-dioctadecanoylglycerol", "notes": {"original_bigg_ids": ["cdpdodecg_c"]}, "charge": -2, "formula": "C48H87N3O15P2", "compartment": "c", "id": "cdpdodecg_c"}, {"name": "CDP-1,2-dioctadec-11-enoylglycerol", "notes": {"original_bigg_ids": ["cdpdodec11eg_c"]}, "charge": -2, "formula": "C48H83N3O15P2", "compartment": "c", "id": "cdpdodec11eg_c"}, {"name": "CDP-1,2-dioctadec-9-enoylglycerol ", "notes": {"original_bigg_ids": ["cdpdodec9eg_c"]}, "charge": -2, "formula": "C48H83N3O15P2", "compartment": "c", "id": "cdpdodec9eg_c"}, {"name": "CDP-1,2-dioctadec-9-12-dienoylglycerol", "notes": {"original_bigg_ids": ["cdpdodec912eg_c"]}, "charge": -2, "formula": "C48H79N3O15P2", "compartment": "c", "id": "cdpdodec912eg_c"}, {"name": "CDP-1,2-dioctadec-6-9-12-trienoylglycerol", "notes": {"original_bigg_ids": ["cdpdodec6912eg_c"]}, "charge": -2, "formula": "C48H75N3O15P2", "compartment": "c", "id": "cdpdodec6912eg_c"}, {"name": "CDP-1,2-dioctadec-9-12-15-trienoylglycerol", "notes": {"original_bigg_ids": ["cdpdodec91215eg_c"]}, "charge": -2, "formula": "C48H75N3O15P2", "compartment": "c", "id": "cdpdodec91215eg_c"}, {"name": "CDP-1,2-dioctadec-6-9-12-15-tetraenoylglycerol", "notes": {"original_bigg_ids": ["cdpdodec691215eg_c"]}, "charge": -2, "formula": "C48H71N3O15P2", "compartment": "c", "id": "cdpdodec691215eg_c"}, {"name": "D-Ribulose 5-phosphate", "notes": {"original_bigg_ids": ["ru5p_DASH_D_c"]}, "charge": -2, "formula": "C5H9O8P", "compartment": "c", "id": "ru5p__D_c"}, {"name": "3,4-dihydroxy-2-butanone 4-phosphate", "notes": {"original_bigg_ids": ["db4p_c"]}, "charge": -2, "formula": "C4H7O6P", "compartment": "c", "id": "db4p_c"}, {"name": "Formate", "notes": {"original_bigg_ids": ["for_c"]}, "charge": -1, "formula": "CH1O2", "compartment": "c", "id": "for_c"}, {"name": "7,8-Diaminononanoate", "notes": {"original_bigg_ids": ["dann_c"]}, "charge": 1, "formula": "C9H21N2O2", "compartment": "c", "id": "dann_c"}, {"name": "DCTP", "notes": {"original_bigg_ids": ["dctp_c"]}, "charge": -4, "formula": "C9H12N3O13P3", "compartment": "c", "id": "dctp_c"}, {"name": "DUTP", "notes": {"original_bigg_ids": ["dutp_c"]}, "charge": -4, "formula": "C9H11N2O14P3", "compartment": "c", "id": "dutp_c"}, {"name": "D-Erythrose 4-phosphate", "notes": {"original_bigg_ids": ["e4p_c"]}, "charge": -2, "formula": "C4H7O7P", "compartment": "c", "id": "e4p_c"}, {"name": "Phosphoenolpyruvate", "notes": {"original_bigg_ids": ["pep_c"]}, "charge": -3, "formula": "C3H2O6P", "compartment": "c", "id": "pep_c"}, {"name": "2-Dehydro-3-deoxy-D-arabino-heptonate 7-phosphate", "notes": {"original_bigg_ids": ["2dda7p_c"]}, "charge": -3, "formula": "C7H10O10P", "compartment": "c", "id": "2dda7p_c"}, {"name": "4 Hydroxy 2 oxoglutarate C5H4O6", "notes": {"original_bigg_ids": ["4h2oglt_c"]}, "charge": -2, "formula": "C5H4O6", "compartment": "c", "id": "4h2oglt_c"}, {"name": "Glyoxylate", "notes": {"original_bigg_ids": ["glx_c"]}, "charge": -1, "formula": "C2H1O3", "compartment": "c", "id": "glx_c"}, {"name": "A-lineloyl-ACP (n-C18 3ACP)", "notes": {"original_bigg_ids": ["octe_LPAREN_9_12_15_RPAREN_ACP_c"]}, "charge": -1, "formula": "C29H49N2O8PRS", "compartment": "c", "id": "octe_9_12_15_ACP_c"}, {"name": "UDPgalactose", "notes": {"original_bigg_ids": ["udpgal_c"]}, "charge": -2, "formula": "C15H22N2O17P2", "compartment": "c", "id": "udpgal_c"}, {"name": "1,2-Diacyl-3-beta-D-galactosyl-sn-glycerol (n-C16)", "notes": {"original_bigg_ids": ["mgdg160_c"]}, "charge": 0, "formula": "C41H78O10", "compartment": "c", "id": "mgdg160_c"}, {"name": "Digalactosyl-diacylglycerol(n-C16)", "notes": {"original_bigg_ids": ["dgdg160_c"]}, "charge": 1, "formula": "C47H89O15", "compartment": "c", "id": "dgdg160_c"}, {"name": "UDP", "notes": {"original_bigg_ids": ["udp_c"]}, "charge": -3, "formula": "C9H11N2O12P2", "compartment": "c", "id": "udp_c"}, {"name": "1,2-Diacyl-3-beta-D-galactosyl-sn-glycerol (n-C16 1)", "notes": {"original_bigg_ids": ["mgdg161_c"]}, "charge": 0, "formula": "C41H74O10", "compartment": "c", "id": "mgdg161_c"}, {"name": "Digalactosyl-diacylglycerol(n-C16 1)", "notes": {"original_bigg_ids": ["dgdg161_c"]}, "charge": 1, "formula": "C47H85O15", "compartment": "c", "id": "dgdg161_c"}, {"name": "1,2-Diacyl-3-beta-D-galactosyl-sn-glycerol (n-C18 0)", "notes": {"original_bigg_ids": ["mgdg180_c"]}, "charge": 0, "formula": "C45H86O10", "compartment": "c", "id": "mgdg180_c"}, {"name": "Digalactosyl-diacylglycerol(n-C18 0)", "notes": {"original_bigg_ids": ["dgdg180_c"]}, "charge": 1, "formula": "C51H97O15", "compartment": "c", "id": "dgdg180_c"}, {"name": "1,2-Diacyl-3-beta-D-galactosyl-sn-glycerol (n-C18 1)", "notes": {"original_bigg_ids": ["mgdg181_c"]}, "charge": 0, "formula": "C45H82O10", "compartment": "c", "id": "mgdg181_c"}, {"name": "Digalactosyl-diacylglycerol(n-C18 1)", "notes": {"original_bigg_ids": ["dgdg181_c"]}, "charge": 1, "formula": "C51H93O15", "compartment": "c", "id": "dgdg181_c"}, {"name": "1,2-Diacyl-3-beta-D-galactosyl-sn-glycerol (n-C18 1)", "notes": {"original_bigg_ids": ["mgdg181_9_c"]}, "charge": 0, "formula": "C45H82O10", "compartment": "c", "id": "mgdg181_9_c"}, {"name": "Digalactosyl-diacylglycerol(n-C18 1)", "notes": {"original_bigg_ids": ["dgdg181_9_c"]}, "charge": 1, "formula": "C51H93O15", "compartment": "c", "id": "dgdg181_9_c"}, {"name": "1,2-Diacyl-3-beta-D-galactosyl-sn-glycerol (n-C18 2)", "notes": {"original_bigg_ids": ["mgdg182_9_12_c"]}, "charge": 0, "formula": "C45H78O10", "compartment": "c", "id": "mgdg182_9_12_c"}, {"name": "Digalactosyl-diacylglycerol(n-C18 2)", "notes": {"original_bigg_ids": ["dgdg182_9_12_c"]}, "charge": 1, "formula": "C51H89O15", "compartment": "c", "id": "dgdg182_9_12_c"}, {"name": "1,2-Diacyl-3-beta-D-galactosyl-sn-glycerol (n-C18 3)", "notes": {"original_bigg_ids": ["mgdg183_6_9_12_c"]}, "charge": 0, "formula": "C45H74O10", "compartment": "c", "id": "mgdg183_6_9_12_c"}, {"name": "Digalactosyl-diacylglycerol(n-C18 3)", "notes": {"original_bigg_ids": ["dgdg183_6_9_12_c"]}, "charge": 1, "formula": "C51H85O15", "compartment": "c", "id": "dgdg183_6_9_12_c"}, {"name": "1,2-Diacyl-3-beta-D-galactosyl-sn-glycerol (n-C18 3)", "notes": {"original_bigg_ids": ["mgdg183_9_12_15_c"]}, "charge": 0, "formula": "C45H74O10", "compartment": "c", "id": "mgdg183_9_12_15_c"}, {"name": "Digalactosyl-diacylglycerol(n-C18 3)", "notes": {"original_bigg_ids": ["dgdg183_9_12_15_c"]}, "charge": 1, "formula": "C51H85O15", "compartment": "c", "id": "dgdg183_9_12_15_c"}, {"name": "1,2-Diacyl-3-beta-D-galactosyl-sn-glycerol (n-C18 4)", "notes": {"original_bigg_ids": ["mgdg184_6_9_12_15_c"]}, "charge": 0, "formula": "C45H70O10", "compartment": "c", "id": "mgdg184_6_9_12_15_c"}, {"name": "Digalactosyl-diacylglycerol(n-C18 4)", "notes": {"original_bigg_ids": ["dgdg184_6_9_12_15_c"]}, "charge": 1, "formula": "C51H81O15", "compartment": "c", "id": "dgdg184_6_9_12_15_c"}, {"name": "(R)-2,3-Dihydroxy-3-methylbutanoate", "notes": {"original_bigg_ids": ["23dhmb_c"]}, "charge": -1, "formula": "C5H9O4", "compartment": "c", "id": "23dhmb_c"}, {"name": "3-Methyl-2-oxobutanoate", "notes": {"original_bigg_ids": ["3mob_c"]}, "charge": -1, "formula": "C5H7O3", "compartment": "c", "id": "3mob_c"}, {"name": "(R)-2,3-Dihydroxy-3-methylpentanoate", "notes": {"original_bigg_ids": ["23dhmp_c"]}, "charge": -1, "formula": "C6H11O4", "compartment": "c", "id": "23dhmp_c"}, {"name": "(S)-3-Methyl-2-oxopentanoate", "notes": {"original_bigg_ids": ["3mop_c"]}, "charge": -1, "formula": "C6H9O3", "compartment": "c", "id": "3mop_c"}, {"name": "2,3-Dihydrodipicolinate", "notes": {"original_bigg_ids": ["23dhdp_c"]}, "charge": -2, "formula": "C7H5NO4", "compartment": "c", "id": "23dhdp_c"}, {"name": "2,3,4,5-Tetrahydrodipicolinate", "notes": {"original_bigg_ids": ["thdp_c"]}, "charge": -2, "formula": "C7H7NO4", "compartment": "c", "id": "thdp_c"}, {"name": "7,8-Dihydrofolate", "notes": {"original_bigg_ids": ["dhf_c"]}, "charge": -2, "formula": "C19H19N7O6", "compartment": "c", "id": "dhf_c"}, {"name": "Dihydropteroate", "notes": {"original_bigg_ids": ["dhpt_c"]}, "charge": -1, "formula": "C14H13N6O3", "compartment": "c", "id": "dhpt_c"}, {"name": "Dihydroneopterin", "notes": {"original_bigg_ids": ["dhnpt_c"]}, "charge": 0, "formula": "C9H13N5O4", "compartment": "c", "id": "dhnpt_c"}, {"name": "2 Amino 4 hydroxy 6 hydroxymethyl 7 8 dihydropteridine C7H9N5O2", "notes": {"original_bigg_ids": ["2ahhmp_c"]}, "charge": 0, "formula": "C7H9N5O2", "compartment": "c", "id": "2ahhmp_c"}, {"name": "(S)-Dihydroorotate", "notes": {"original_bigg_ids": ["dhor_DASH_S_c"]}, "charge": -1, "formula": "C5H5N2O4", "compartment": "c", "id": "dhor__S_c"}, {"name": "Orotate", "notes": {"original_bigg_ids": ["orot_c"]}, "charge": -1, "formula": "C5H3N2O4", "compartment": "c", "id": "orot_c"}, {"name": "2 5 Diamino 6 hydroxy 4  5  phosphoribosylamino  pyrimidine C9H14N5O8P", "notes": {"original_bigg_ids": ["25dhpp_c"]}, "charge": -2, "formula": "C9H14N5O8P", "compartment": "c", "id": "25dhpp_c"}, {"name": "3-Dehydroquinate", "notes": {"original_bigg_ids": ["3dhq_c"]}, "charge": -1, "formula": "C7H9O6", "compartment": "c", "id": "3dhq_c"}, {"name": "3-Dehydroshikimate", "notes": {"original_bigg_ids": ["3dhsk_c"]}, "charge": -1, "formula": "C7H7O5", "compartment": "c", "id": "3dhsk_c"}, {"name": "1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate", "notes": {"original_bigg_ids": ["h2mb4p_c"]}, "charge": -3, "formula": "C5H9O8P2", "compartment": "c", "id": "h2mb4p_c"}, {"name": "Dimethylallyl diphosphate", "notes": {"original_bigg_ids": ["dmpp_c"]}, "charge": -3, "formula": "C5H9O7P2", "compartment": "c", "id": "dmpp_c"}, {"name": "Dihydroneopterin monophosphate", "notes": {"original_bigg_ids": ["dhpmp_c"]}, "charge": -2, "formula": "C9H12N5O7P", "compartment": "c", "id": "dhpmp_c"}, {"name": "2-Amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)dihydropteridine triphosphate", "notes": {"original_bigg_ids": ["ahdt_c"]}, "charge": -4, "formula": "C9H12N5O13P3", "compartment": "c", "id": "ahdt_c"}, {"name": "Dephospho-CoA", "notes": {"original_bigg_ids": ["dpcoa_c"]}, "charge": -2, 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